-
Hi,
I was wondering if this useful pipeline would be possible to run on ARM64-based Linux VM? When I ran a test with --help it could work; but when I ran it on my dataset it would fail. Seem like i…
-
Hi @bluenote-1577,
Just wondering if there are any plans to make flopp available through conda? We're planning to include it for a haplotyping step as part of a larger pipeline and it would keep th…
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/huerqiang/mhAnalysis
Confirm the following by edi…
-
Hello guys!
Thank you for updating the viral taxonomy in VIRify version 2. I installed the new version using `nextflow pull`.
`$ nextflow info EBI-Metagenomics/emg-viral-pipeline
project name:…
-
Hi,
I am currently trying a few data analysis options to detect viral contaminations in my sample. Therefore, I also wanted to test the metagenomics workflow, and also compare the minimap2 and the …
-
This needs to be done, @guille0387 detected which ViPhOGs belong to discontinued viral taxa such as the families _Siphoviridae_, _Myoviridae_, ...
Re-calculating the models is not so easy, but for …
-
It has been determined that the sequencing workflows output a human readable description of workflow. ReadbasedAnalysis is higher priority b/c we'll need to run it on datasets for GSP. FYI @ssarrafan…
aclum updated
11 months ago
-
### What happened?
wf-metagenomics stalls at process kraken_pipeline:kraken_server
I use wf-metagenomics v2.0.1 and nextflow 22.04.1.
I do not get issues when running wf-metagenomics v1.1.4
# …
-
By updating the virsorter container to the one hosted in biocontainers we introduced a regression: https://github.com/simroux/VirSorter/issues/68.
VirSorter extends the prophage sequence by 50 nucleo…
-
Tracking updates of www.redditgifts.com