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Currently MAGeTbrain BIDS App creates copies of inputs in the output directory (under `input/` subfolder) this is perfectly fine, but could inflate the size of the output package that is archived and …
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Hi,
I'm running fmriprep on a dataset with AP/PA fieldmaps, and got a same error in `pepolar_unwarp_wf.prepare_epi_opposite_wf.merge` and `pepolar_unwarp_wf.prepare_epi_matching_wf.merge` for all of …
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Hello ndmg repo,
I was trying to test out the software, but was having trouble w/ the correct docker syntax call. My data passed BIDS validation and ndmg gets pulled fine. I then tried to run this…
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When trying to load https://openneuro.org/datasets/ds001049
```
Uncaught TypeError: Cannot read property 'length' of undefined
at t.value (/app.min.4f999727.js:50)
at t.value (/app.min.4…
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I converted a single band DTI set and a pair of TOPUP scans into BIDS data structure using dcm2nii (passes BIDS validation - see screenshot below).
The same set can be processed successfully by…
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I'm getting this error when I try to convert the bids/cpac from docker to singularity:
```
sudo docker run --privileged -ti --rm -v /var/run/docker.sock:/var/run/docke
r.sock -v /home/egarza/MRI/…
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I assumed from ndmg documentation that structural connectomes can be created using many pre-defined atlases. However, the README doesn't mention how to specify location of an atlas as an input.
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Some arguments use underscores `--participant_label` and some use hyphens `--task-id` this can be confusing. We should make them all use one schema (preferably underscores unless we want to change the…
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This could be a commit hash or a tag. By specifying it in Dockerhub you will be able to trigger image rebuilding by updating the version in the file. It also helps with figuring out which version was …
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We ran the default Baracus model on two different datasets. The Cortical Surface Area age predictions were generally very off. For the first dataset, the Mean Absolute Error was ~105.02 years for are…