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I noticed there was no LICENSE.md on this repo, which makes it very challenging for others to build off of safely.
This work looks *incredible*, and I (among many others) would love to be able to u…
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Hi Daniel,
I have used carveme to built multiple GEMs, and ran them through MEMOTE to asses their quality. For the GEMs I have tested, stiochiometric consistency is 0 and 6 unconserved metabolites …
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Hi,
I love this editor but there is one thing that really bugs me. Some latex macros are redefined by the `physics` package such as `\tan`, which changes the size of parentheses which come after it…
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It is with great pleasure that we would like to submit the SBML Level 3 Flux Balance Constraints Specification Version 2 specification, on behalf of the FBC Package Working Group (PWG), for approval.
…
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Note from @BoboTiG: issue tightly coupled to #1183, interesting details can be found there too.
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I did a fresh download and render of the EN wiktionary today, and got the following errors:
…
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The PyPI token (https://github.com/biosimulations/biosimulations/settings/secrets/actions) no longer works. A new token needs to be generated for the `biosimulations` PyPI account and saved to `PYPI_T…
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hello,
when I ran the code
$ emapper.py -m diamond -i pan_genome_reference.fa --itype CDS --translate -o panmaptoeggnog --data_dir /home/database/eggnog5/ --cpu 16
it got the error:
Traceback …
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## Minimal code example to reproduce the problem
```
using COBREXA
download("http://bigg.ucsd.edu/static/models/RECON1.json", "RECON1.json")
model = load_model("RECON1.json")
cm = convert(C…
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I have before visualised reactions on VMH Recon Map (with the help of Cobra toolbox tutorial). I would now also like to color metabolites, but I found no appropriate tutorial.
I have tried to use met…
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The episode play now but I can't change the video quality.
There's only
(Auto)
1080p