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When on Windows, an error is thrown when saving the new image as ome-tiff
```
loci.formats.UnknownFormatException: Unknown file format: C:\Users\Johnny
at loci.formats.ImageWriter.getWriter(…
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Hi folks
@haesleinhuepf @bnorthan
I'm testing the CLIJ2-fft convolve function pretty hard.
I notice that it only seems to work if the input image is smaller in xy than the PSF (kernel) image.
…
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Hello,
I am unsure whether reporting this here is the proper way to bring this up but I seem to be having a very similar issue as the one previously brought up here: https://github.com/qupath/qupat…
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@haesleinhuepf @nornil
I think I have everything in place now for some benchmarking. The issue is that there is an exponential number of parameter combinations and we thus have to limit ourselves.…
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The version bundled with Fiji works fine but the released version here causes a crash every time.
The issue is this version was the only one that resolved a Z stack # encoding issue with older h5j …
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When I clicked on the eye of "analyze results" to see the table with number of particles, slices, etc in the results of a 3D classification, the window was blocked for 15 minutes or so. I killed manua…
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## 🚀 Feature / Motivation
I am working a bit to use transformations derived from _elastix_ using _napari_'s 2D linear transformation rendering. The good news is that it mostly works, but I have a que…
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Hi
Great tool, clij.
Just getting used to it. Amazing
I started using it, but I get these error messages when I via the 'clij assistant':
- Filter(noise removal) --> Gaussian Blur3D(CLIJ2)
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As far as I understood from documentation, initializing `ij` with `imagej.init('sc.fiji:fiji')` should load all the standard Fiji packages. However, when I attempted to run it only 1 JAR was loaded (`…
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Hi, I try to run the MiNA, But I failed everytime
Could you help me to figure out this problem?
Thank you!
[INFO] Reading available sites from https://imagej.net/
[ERROR] Traceback (most recent …