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https://mp.weixin.qq.com/s/VCRukFCQaagTF6GKu2DLgA
ixxmu updated
3 years ago
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Hi,
The goal here is to practice the GitHub management tools, using `sgejobs`, and start editing some of our analysis scripts.
The task is to create a new R script that will create a new `cov_rs…
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Hi I am trying to make three sets of annotations on my heatmap: Diagnosis, Respiratory_Status and hsCRP. They all work individually but I can't get them to appear all together.
I have used the fol…
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馬鹿正直にOTUでやると10万オーダーでplotされてしまうので無理
方針1: 存在量の多いOTUに限定して解析
方針2: orderぐらいまで落として解析
- この場合でもレアなorderはまともなデータが出ない?
共起ネットワークとかNMDSとか色々あるけどデータ多いしNMDSいけるのでは。ノンパラだし存在量の影響もそんな受けなそう
一旦エイっとNMDSやろう
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Hi Basel,
I ran with 10686 genes and all my interesting genes are missing.
Is there anyway to run it without filtering? Also do you have any idea to add optimal K number ?
For example from mclus…
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ghost updated
4 years ago
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Hi everybody! I need some help to figure out way I have problems in exporting a data frame of clinical data in txt.
So, basically I download RNA-seq data, then I create an expression matrix and a da…
ghost updated
4 years ago
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Hi ,
I am trying to run CEMiTool with a sample annotation file but get the following error-
cem
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Functional Hunter is not working. In case of no-wgcna execution, it breaks during markdown template execution giving this error
`Quitting from lines 354-419 (functional_report.Rmd)
Error in fc_r…
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Make an entry reviewing the fast correlations
```r
stats::cor
WGCNA::cor # 104 dependencies
miRcomb::cor
coop::pcor # see the vignette for more references
HiClimR::fastCor
```