BaselAbujamous clust issues

BaselAbujamous / clust

Automatic and optimised consensus clustering of one or more heterogeneous datasets

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issues

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How do I control the PDF output to make the x-axis with sample names more readable?

#83 SchwarzEM opened 1 month ago
0
Segmentation fault on example dataset

#82 christabucao opened 2 months ago
0
ValueError during concatenation in output.py script

#81 SuvratK opened 6 months ago
0
Issue with --no-fil-flat

#80 lucasinchausti opened 1 year ago
0
Fix scipy random

#79 BaselAbujamous closed 1 year ago
0
Different number of clusters and genes in each cluster based on the order of samples in Replicates.txt file

#78 dadrasarmin opened 1 year ago
0
AttributeError: Module 'scipy' has no attribute 'random'

#77 gazalk closed 1 year ago
13
Type conversion errors when reading replicates file

#76 ijhoskins opened 2 years ago
7
setup file typo/bug fixes

#75 BaselAbujamous closed 2 years ago
0
removed n_jobs from sklearn calls due to deprecation

#74 BaselAbujamous closed 2 years ago
0
clust not working after installing via bioconda

#73 ethanjredmond opened 2 years ago
1
Getting error when executing clust

#72 diego-perojil closed 2 years ago
4
Can this be used with a precomputed distance matrix?

#71 jolespin opened 2 years ago
0
Color !

#70 saheljahan opened 2 years ago
0
Server Error in '/' Application.

#69 pekingsci opened 2 years ago
1
Feature Request - Separate image for each cluster

#68 sagarutturkar opened 2 years ago
0
how to choose a better tight value '-t' ?

#67 Ruismart opened 3 years ago
0
IndexError: arrays used as indices must be of integer (or boolean) type

#66 aliceb5 opened 3 years ago
0
not able to normalize the expression raw dataset using clust

#65 vishnurun7 opened 3 years ago
0
drastically different results between version 1.8.10 and version 1.12.0

#64 ereverman opened 3 years ago
3
Details about how expression values in replicates are collapsed to one (per condition) value

#63 SamMondal opened 3 years ago
1
Error using replicates files

#62 anikaliu opened 3 years ago
0
PDF file is missing

#61 hba151 opened 3 years ago
0
ValueError: could not convert string to float

#60 nat2bee closed 3 years ago
2
MemoryError

#59 Hamsini-Ray closed 3 years ago
1
Default Y-axis label in plot

#58 ikar1234 opened 3 years ago
2
Typo fix in README

#57 BaselAbujamous closed 4 years ago
0
more_itertools versioning???

#56 DallasThomas closed 4 years ago
1
error Processed_Data file (normalized data)

#55 incle440 opened 4 years ago
0
NameError: name 'Ds' is not defined

#54 dsjones552 closed 4 years ago
3
Unrecognised replicate name (sMEPI_rep1) in line 1 in replicates

#53 Zefeng-Wu closed 3 years ago
1
Fix page output

#52 johnomics closed 4 years ago
0
Subclustering: inconsistent co-abundance pattern

#51 MiguelCos opened 4 years ago
7
"Error: could not save clusters plots in a PDF file." with more than 11 clusters

#50 michallipinski closed 4 years ago
5
TypeError: Cannot cast array from dtype('O') to dtype('float64') according to the rule 'safe'

#49 maxnest closed 4 years ago
2
Clust 1.10.7 incompatibility issue with Pandas 0.25.0

#48 adriayumi closed 4 years ago
1
How to deal with missing data values

#47 andhartm closed 5 years ago
2
TypeError: Cannot cast array from dtype('O') to dtype('float64') according to the rule 'safe'

#46 zebrafish-507 closed 5 years ago
0
ImportError: No module named numpy

#45 jianhaizhang closed 5 years ago
3
Too many genes not included in any cluster

#44 LQHHHHH closed 5 years ago
1
Too many missing genes

#43 wyim-pgl closed 4 years ago
1
Fixed a bug in v1.10.0 generating the PDF for the plots

#42 BaselAbujamous closed 5 years ago
0
Smaller and more clusters

#41 jianhaizhang closed 4 years ago
1
cluster plots in PDF issue

#40 Wen-Juan closed 5 years ago
12
Migrate to python3

#39 BaselAbujamous closed 5 years ago
0
Order of genes in the output vs the input

#38 BaselAbujamous closed 4 years ago
0
Runclust to return clustering

#37 BaselAbujamous closed 5 years ago
0
plot

#36 wangjingshen closed 5 years ago
1
plot issue

#35 wangjingshen closed 5 years ago
6
Run command

#34 jianhaizhang closed 5 years ago
4