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## Basic information
```
❯ pip show cellphonedb
Name: cellphonedb
Version: 5.0.1
Summary: Inferring cell-cell communication.
Home-page: https://github.com/ventolab/cellphonedb
Author: The Cel…
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Hello, thank you for the great tool!
I used SCENIC many times, running it with macOS and it worked very well and had no probloms. After updating my macOS to the new Big Sur update i am trying to ru…
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Currently, 32% of our associations in 0.8 have no genomic coordinates assigned to at least one feature.
These fall into the following categories:
- [ ] Associations harvested from CGI all lack e…
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The following two PAINT nodes are associated with the same Panther family - is that meant to happen? They are annotated with related, but different MFs:
PTN000599576 => NUCLEOTIDE KINASE (PTHR2335…
sjm41 updated
3 months ago
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Even if IGH gene is now loaded into the scout database and it's available when loading a case, variants still don't display the link to the right IGH gene after they're loaded.
To reproduce localll…
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For example: [HERC2P9](https://platform.opentargets.org/search?q=herc2%20pseudogene%209&page=1&entities=target) or [AKAP17A](https://platform.opentargets.org/search?q=AKAP17A&page=1&entities=target) a…
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_(there is probably another issue with this, but I couldn't find it)_
What are **"MONDO:####-obsoleted"** used for source?
What do they represent?
Eg: MONDO:0013626 - 'psoriasis 14, pustular'
…
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We do not have the --minimal flag on the command line.
VEP v110 minimises the alleles in our output (we use --tab).
VEP v109 does not exhibit this (unpleasant) behaviour.
**Our command line:**
/…
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[tomte](https://github.com/genomic-medicine-sweden/tomte) and other pipelines including [DROP](https://github.com/gagneurlab/drop) components will produce shortlists of aberrant expression (`OUTRIDER`…
dnil updated
2 months ago
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Noob question with probably a simple answer staring me in the face, but how can I determine which registry entires are formal ontologies vs. controlled vocabularies vs. databases/repositories vs. [oth…