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## Environment data
- Language Server version: v2020.10.2
- OS and version: local = Mac Catalina 10.15.7, remote via SSH = Ubuntu 16.04.7 LTS
- Python version: Anaconda 3.8.5
## …
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The recent malleability issues exposed some cases not covered by the accounting system. Rather than fix it, the consensus seems to lean towards scrapping the accounting system entirely, and returning…
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Build 'bergamot-translator' is failing!
Last 50 lines of build output:
```
[...truncated 1.69 KB...]
Checking out Revision c28687fffb1ceab1befc094f06ac0671108a2c5c (origin/integration)
Commit messag…
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I am getting this error message when running the Philosopher pipeline on phosphoproteomics data
`time="15:39:33" level=fatal msg="Cannot execute program. There was an error with PTMProphet, please ch…
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FYI:
MMseqs2 has been committed to the FreeBSD ports collection.
It might be helpful to users if you could post a message like
the following on your website:
Thanks!
MMseqs2 can be installe…
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**Describe the bug**
Relevant files attached: [3sgj_smr.tar.gz](https://github.com/pharmai/plip/files/5035265/3sgj_smr.tar.gz)
I'm trying to obtain the PLIP interactions for file `3sgj_smr.pdb` …
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The following command works just fine with pdb2pqr2.1.1 whoever the equivalent command fails with the following error messages.
```python
pdb2pqr2.1.1
os.system('python ./dependencies/pdb2pqr2.…
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**Describe the bug**
In multimeric complexes, some structures might have (incorrectly?) annotated copies of the same ligand with the same name, residue id and chain id. The computed ligand instance…
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- quant isobaric fail because no reporter ions were detected. the parameters are the default for TMT10-MS3 workflow . I don't know what and if my parameters are wrong.
- log file
[log_2021-09…
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**Original article:** [A Neurodynamical Model for Working Memory](https://www.sciencedirect.com/science/article/abs/pii/S0893608010001899)
**PDF URL:** [\[Re\] A Neurodynamical Model for Working Me…