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Peter mentioned that he wanted us to do enrichment tests on the FDR significant genes for each subregion and for both. He also mentioned that Leo has code that I could adapt to this end. I'm opening t…
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Hi,
I install the cellBrowser use conda (`conda install -c bioconda ucsc-cell-browser`) and use sample data to test whether it works.
Here is the code that I'm running:
```
curl -s https://cell…
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Hi,
I am having error while trying to read methylation data using minfi:
```R
getGEOSuppFiles("GSE122126")
untar("GSE122126/GSE122126_RAW.tar", exdir = "GSE122126/idat")
idatFiles
boseb updated
3 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/PascalSchlosser/netboost
Confirm the following by…
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I have performed DAA on glycandata.xlsx and now want to run WGCNA on it. If I use glycandata.xlsx as the input(according to the CAMPP manual), it gives the following error.
Error: WGCNA may be perf…
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I'm assigning you the literature report on ML/DL/AI techniques on large transcriptome data.
Deadline 7th August
If you have any doubts, feel free to write questions here or by email , phone etc…
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https://mp.weixin.qq.com/s/Jd73HR7WpohL8d1smFcEtQ
ixxmu updated
3 years ago
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https://mp.weixin.qq.com/s/qqYzrXlM8CDCC-CEoZj-_g
ixxmu updated
3 years ago
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https://mp.weixin.qq.com/s/sEA6G9aMDb0iQJgXWCa2nQ
ixxmu updated
3 years ago
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I cannot express how valuable this function would be if it was implemented in `networkx` because as of now I have to use `rpy2` with a very specific environment to use `WGCNA`. This function takes in…