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Sometimes, when the filesizes for simulations become large, the http protocol for the synapse doesn't seem to carry this information over the wire back to the vali. A result of this is that miners who…
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Check out [this sample user guide](https://github.com/uio-cees/hpc/wiki/Using-PBHoney) on how to use different stages of PBHoney.
Depends on #3 & #4
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Hi there!
Thank for mold program!
I'm using the Mold GUI for macOS under Sonoma 14.5, Python Version: >3.6, Mold 1.4.
I encountered an UnboundLocalError when running MolD for DNA diagnoses of …
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Hi, I am using RepeatMasker v4.1.5 to mask repeats from a shrimp genome P. indicus, the *.fa.cat.gz was produced but the fa file cannot be masked. So I rerun the ```ProcessRepeats``` step:
``
Proc…
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![track_missing](https://github.com/genotoul-bioinfo/dgenies/assets/7921694/fd1ba899-65d2-4a6a-97ee-d6812be4696e)
Data are from ensembl:
- top track (target): Arabidopsis_lyrata
- right track…
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### Description of the bug
Error in the genome index step using both 2.3.0 or dev versions using the command below.
All reference files are from mirbase and fasta from Ensembl.
The test run worke…
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### Operating System
macOS
### Other Linux
_No response_
### Workflow Version
v1.4.0
### Workflow Execution
EPI2ME Desktop (Local)
### Other workflow execution
_No response_
### EPI2ME Versi…
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**Binning DNA sequences**
_Write a program which creates nine new folders – one for sequences between 100 and 199 bases long, one for sequences between 200 and 299 bases long, etc.
Write out each …
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### Describe your feature request precisely
From your documentation:
>* molecules files such as cif, pdb, sdf, mol files, they will display the molecule in 2D or 3D
>* DNA files such as fasta, gb…
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Hi,
I used conda version of 3D-DNA (version 190716) to scaffold my genome.
However, I have not got FINAL files including FINAL.fasta, FINAL.hic although no errors were not observed in log file.
…