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When this issue was opened, 151 active ontologies in the OBO Foundry did not have a `publications:` entry in their metadata. This field is used to generate the citation information on the ontology pag…
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I am trying to run philosopher pipeline with version 5.0, but I keep getting an error. The data consist of 12 samples and 48 fractions for each sample (label free). I get this error when I try to lau…
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Hi,
thanks so much for developing this integrated tool. I'm a beginner in proteomics data analysis.
Is there a workflow for identifying O-glycosylated peptides / proteins for TMT11 experiments? I s…
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During the last submission another problem surfaced when running the submission prep and frictionless tool:
Term 'OBI:0001985' has no name: if the term ID isn't a typo, please check integrity of 'a…
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**Describe the bug**
When GoldenDict tries to index this very large (12G) dictionary, it fails after ~30 mins with error message:
```
"Slob dictionary initializing failed: /home/jrpear/Blobs/enwiki…
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Biomarker DB (aka OncoMX) source file now includes protein and glycan entries. See below to update existing human_protein_biomarkers_cancer.csv dataset (**change file name to human_protein_biomarkers.…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/ELELAB/CAMPP2
Confirm the following by editing ea…
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I got some errors when i run gmx_MMPBSA_test
(gmx_MMPBSA v1.5.7 based on MMPBSA version 16.0 and AmberTools 20)
Here are the details:
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CO…
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Hi There
I Got the search result but the PDV can't display the spectrum.
Invalid spectrum file path. Please check it.
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Hi,
During the last submission another problem surfaced when running the submission prep and frictionless tool:
Term 'OBI:0001985' has no name: if the term ID isn't a typo, please check integrit…