-
I noticed this odd BN.1.3.5 singlet sequenced
hCoV-19/France/IDF-APHPSU_PSL-662405025479/2024|EPI_ISL_19193543|2024-05-12
BN.1.3.5 wasn't common in France, much more so in East/South East A…
-
Intro **i think the original proposal should be updated in this way** (_Edited and Updated_ BY MOD): I would like to recapitulate current situation looking at the downsampled tree:
https://nexts…
-
By Japan COVID-19 Open Data Consortium
Description
Sub-lineage of: BF.7.15 (2,139 sequences)
Earliest sequences: 2022/9/27 (hCoV-19/Japan/PG-428825/2022, hCoV-19/Japan/PG-428826/2022, hCoV-19/Jap…
-
Breakpoint in RBD, 5' is DV.7.1, 3' is XBB.1.16
https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_2b165_307a70.json?s=USA/CA-HLX-STM-KT4WHJEUM/2023%7CE…
-
GN.1 with mutation S:G181V and nucleotide T2548C,T21799C spread in Peru
by Group of Genomic Surveillance INS-PERU
Description
Sublineage of: Potencially new sublineage of GN.1.X (S:G181V and nucl…
-
Dear @tgvaughan,
When I run the `./run_analysis.sh` script: it print:
no main manifest attribute, in ./beast.jar
no main manifest attribute, in ./beast.jar
no main manifest attribute, in ./beas…
-
From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253 branch 4 and https://github.com/sars-cov-2-variants/lineage-proposals/issues/1262
JN.1+G17334T,G24872T(S:V1104L)
GISAID …
-
Dear @JetVirology22,
I find that the breakpoints in Fig. 2A with red color are different from SuppleTable 2, the breakpoints have 99% CI, I am confused, could you please help me out, thanks.
-
Organisms:
Pig, Fruit fly, HCV-H, HCV-Japanese, HCoV-SARS, Mouse, Rat, SARS-CoV-2, Yeast.
All above species in protein search return no results.
API: https://api.tst.glygen.org/protein/search?que…
-
_https://github.com/sars-cov-2-variants/lineage-proposals/issues/991 Part I
https://github.com/sars-cov-2-variants/lineage-proposals/issues/1675 Part II
https://github.com/sars-cov-2-variants/lineag…