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Hello,
I am trying to use the estimator for cell cycle phase.
Can you give more information on how you estimate the cell cycle phase? I found the method super close to the CellCycleScoring functio…
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Step to reproduce:
1. Go to SCXA home page and click on `CFTR` link from the list of examples
**Expected result:**
In the resulting table the `Number of assays` should be populated of the number of…
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Hello.
I am using version 3.2.4.
I have about 900 sets of bipartite macro genomic data all reporting the following message when running stage_two:
"No target sequence detected in file , no further …
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Hi Alessio,I move a new question here,
I ran all bins and found that two bins were matched, one is bin.unbinned.fa another is bin.592.fa,but only four gene match. the following code is the details
…
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Hello MetaXcan
I am trying to use SPrediXcan.py with the mashr Brain_Cortex training model db file, covariance file txt.gz, and GWAS summary data(chromosomes information compiled in just one text fi…
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Hi,
I don't know if this question is redundant but my first search on this topic was unsuccessfull and I'm still a beginner in this field.
I have microbiome data from two marker genes 16S and a fun…
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Use this issue to accumulate citations of paper that are relevant to the project. Cite papers in the following format:
---------------------
APA citation, ending with DOI.
Brief summary.
Reaso…
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Hi,
Thank you so much for your amazing package!
I have been following one of your example codes: https://github.com/jlakkis/CarDEC_Codes/blob/main/Evaluations%20of%20CarDEC/CarDEC_monocyte.ipynb.
…
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For many of the scRNA-seq datasets that Carlo and I have uploaded, the UMAP/tSNE displays well on the front page, but the clusters from the primary analysis are not available in the Single-Cell Workbe…
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https://doi.org/10.1101/gr.110882.110
# Authors
Saiful Islam, Una Kjällquist, Annalena Moliner, Pawel Zajac, Jian-Bing Fan, Peter Lönnerberg, and Sten Linnarsson
# Year
2011
# Abstract
…