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### Version
1
### DataCap Applicant
Genet
### Project ID
1
### Data Owner Name
NHGRI
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Websi…
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Hi, I was wondering if you or someone has used your algorithm and reference atlas to deconvolute whole genome bisulfite methylation sequence data (WGBS)? I tried using it for some samples but, it pred…
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### Data Owner Name
ENCODE Data Coordinating Center
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Website
https://www.encodeproject.org/
###…
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How to prepare data for WGBS data , Thank you!
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I have a DNA methylation matrix with 30 samples and about 770k probes. Two phenotypes exist in these 30 samples. I would like to compare samples with different phenotype and obtain the differential me…
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As per our discussion, we will define the molecular phenotype object of cpg site by a cis window around the TSS of each gene. However, one of the problems of this approach is how to handle the cpg sit…
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GO annotations provide links between proteins and GO biological processes and functions related to post-translational modifications of histones.
There is a process (https://www.ebi.ac.uk/QuickGO/te…
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Please provide as much information as you can:
* **Suggested term label:**
histone H3-K27 methyltransferase activator activity
* **Definition (free text)**
def: "Binds to and increases the …
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Fang Lab,
Unfortunately the singularity installation option wasn't working for for our campus cluster or my lab machines. As such, I had to set up a conda environment on our cluster and attemptted …
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I have set `make_snps = True` at the `extract` step in the `config` file as below to get SNP output. Although it runs the process and generates the [specified](http://statgen.cnag.cat/gemBS/UserGuide/…