-
**Background**:
The [cBioPortal](http://www.cbioportal.org/) R client opens up cancer sequencing data hosted on the cBioPortal for Cancer Genomics to alternative analysis platforms such as [Biocon…
-
During the execution of the second step, we encountered a problem: "A USER ERROR has occurred: Failed to read bam header from data/RNAseq/input_bam/example1/ERR2756905.bam
Caused by:data/RNAseq/input…
-
Thanks a lot for the decontam package. i am extremely new to programming and i tried out decontam .
i started with the "iscontam" function
1) The first graph is a histogram which influenced my c…
-
Dear mirlyn developers,
First of all I would like to congratulate you for the mirlyn R package and the concept of rarefaction multi-iterative.
I know that the R package is in the initial phase, …
-
Consider structure of OMA. How much general information there should be about microbiome data science (not directly related to miaverse)? Should we structure the book differently? Currently it seems t…
-
Posted here!
https://taylorreiter.github.io/2022-07-28-From-raw-metagenome-reads-to-phyloseq-taxonomy-table-using-sourmash-gather-and-sourmash-taxonomy/
-
Looking over the existing issues, I get all excited about the things I will learn next week!
But I am reminded of advice I got from someone much wiser re: teaching … if you think your material is rea…
-
Please install
priority
- [ ] toolshed.g2.bx.psu.edu/repos/iuc/krakentools_extract_kraken_reads/krakentools_extract_kraken_reads/1.2+galaxy1
others
- [ ] toolshed.g2.bx.psu.edu/repos/iuc/krake…
-
I applied your script on my data. As you can see in the metadata I have a column called traitment with ( CTRL , TR1 ,TR2 and TR4)
ko_abundance_file
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/wejlab/LegATo
Confirm the following by editing ea…