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Greetings,
I use topfd on linux (Debian). I noticed that some options specified in the topfd GUI are not correctly populated when launching the topfd command.
For example, I have `0.5` as th…
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Hello, and thank you for maintaining this tool!
To enhance the identification of spectral raw files, we would like to request the addition of an "ms_run[x]-file_hash" parameter to the MTD table. Si…
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Polarity information is usually present in imzML files, either in the ``, e.g.
```
```
or per-spectrum, e.g.
```
```
If the polarity is p…
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Hello,
I'm trying to run PbfGen on this mzML file, and getting the error "An item with the same key has already been added". Could you help me understand why and how I might fix this?
https://ww…
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### Basic information
* My operating system and version: Intel Core i7-6700K. Windows 10 22H2
* My mzmine version: 4.2.0
### What happened
Previous steps applied to files:
MS1 and MS2 featu…
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### Description of feature
Hello quantms team,
I would like to request the addition of support for the `.dia` file format as an input option in the **quantms** pipeline. Currently, as per the do…
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I'm currently using `MsBackendHdf5Peaks` backend to load several `mzML` files simultaneously:
```R
fls
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Hello all. I was getting the rather vague error
```
Problem opening mzml file spectra/Ctrl1_5min_total.mzML; One or more errors occurred.
```
When I re-converted my files using different settings…
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Currently it's really, really awkward to deal with the case that we have several substances measured e.g. once each, but at different collision energies. Either I have to put an unspecific entry in th…
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Have this old Shimadzu MALDI that doesn't really allow bulk spectra exporting in the usual formats like mzml, but only in just `.xml`.
I tried using the default import function to try and parse thi…