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If refine mzML crashes, there will a problem where refined mzml db entries are not checked and the set of them is marked as "Incomplete" in the interface, which (currently) blocks the analysis. Resolv…
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I am trying to convert a .cdf file from a Shimadzu machine to .mzml to use in GNPS, and when I try, it says that exporting to .mzml requires the openchrom parser, but when you use openchrom it says it…
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- Currently the streamlit implementation only supports MGF files as spectra input
- Theoretically fragannot and fraggraph support input of mzML
- _theoretically_ because not everything works depen…
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Hi
I am trying to use Oktoberfest for rescoring several datasets. In most cases Oktoberfest runs with no issues, but in some cases it crashes with the error message that it could not find any target…
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Hi @vdemichev. I use the following command to assemble an empirical spectral library from the `.quant` files. but it doesn't seem to work.
`diann --f RD139_Narrow_UPS1_0_1fmol_inj1.mzML --f RD139_…
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WIFF files converted to mzML using the SCIEX data converter yield an error in MetaMorpheus, `Run failed, Exception: !msOrder.HasValue || !isCentroid.HasValue`, while converting the same WIFF using Pro…
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We are thinking of transitionig from zthe "sample centric" to an "analysis centric" approaches.
This means that there should no longer be `/pos`and `/neg`subdirectories within the sample dir but rath…
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At the moment, filtered data is stored as images only. There is no option at the moment to convert it back into mzXML or mzML files (at least for images containing more than a single map).
This conve…
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### Basic information
* My operating system and version:: Windows 10.0
* My MZmine version: 3.4.16
### What happened
I have wiff file that I have converted by MSConvert in 64bit MzML. When I o…
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For RAMClustR & WaveICA, we need a metadata table with the structure shown below:
sample_name | class | sampleType | injectionOrder | batch
-- | -- | -- | -- | --
VT_160120_002 | sample | sample …