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Hello,
I tried to run the preprocessing on a 2D time image and get the following output. Am I doing anything wrong?
```python
2024-08-06 | 13:01:31.337 :: WARNING:root:[__init__.py:22] :: GPU p…
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When viewing OME-tiff raster images, a spatial scale bar is included. I'm not sure what data uses in the tiff metadata to support this, or if it is possible to include support when using zarr, but sho…
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hello,the original svs has 5 level 80X 40X 20X 10X 5X ,how to make the ome.tiff save 20X rather 80X
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hi @JoOkuma,
What are your recommended image file format? Are OME-TIFF or OME-Zarr good? What would be the pros and cons?
If so, are you shipping python libraries to open them?
Our current co…
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With source image https://downloads.openmicroscopy.org/images/OME-TIFF/2016-06/bioformats-artificial/single-channel.ome.tif, these give different output on Ubuntu Xenial with zzuf from master and libt…
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Using the Deepzoom protocol with a tiled TIFF (non-pyramidal) seems to result in incorrect tiles being sent by IIP. Same requests to a pyramidal version of the same image result in correct tiles.
F…
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Hi
Great tool, thanks!
I've managed to get Calculate-Transforms to work on some ome.tiff files but when I tried to Apply-Transforms I get the following error:
`ERROR: Cannot invoke method readI…
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This issue was raised on forum thread https://forum.image.sc/t/ome-tif-multi-channel-tiled-pyramid-from-individual-large-tiff-raw-files/23690/25
A sample file has been provided that reproduces the …
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**Describe the bug**
The ome_tiff_remote.Rmd and ome_tiff_local.Rmd fail to load the image, the loading indicators in all panels keep spinning, except for the Status panel which reports "Promise.allS…
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Dear Tischi,
thanks for the nice tool. I was wondering is you can create an import an ome.xml file created from a Viventis microscope.
I attach the ome file here. The tiff files are multi-page …