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To connect the PASS1B-06 DEA results data to the phenotypic data, we need to map each unique `feature_id` (present in the DEA results) to a list of associated `vial_label` (present in the phenotypic d…
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It is a next step to the discussion which happened in
- https://github.com/bids-standard/bids-2-devel/issues/36
On a recent road-trip with @effigies we briefly discussed it and so far did not see …
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One thing to consider is that CSV is probably still a more common file format for phenotypic (and even other types of) tabular data than TSV, generally speaking. Not sure, however if this is a good en…
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different types of users would like different reporting structures across the data.
For a program officer, perhaps a graph showing accumulation of model organisms of X,Y,Z species that have asserted…
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With the new content being integrated into NIF for authors/citations by ChrisC, we could have a "find collaborators" tab, for some of our entities.
For example, on a disease page, you may wish to enr…
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hacking session with @julesjacobsen we noticed an oddity:
Is there a TPV on the left side here?
here it is as a tree:
* [i] HP:0000118 ! Phenotypic abnormality
* [i] HP:00001…
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Hi, I tried to use the BioLink model as base to run the SPIRES engine (as it was recommended in the readme!), but faced some issue.
Generating the `.py` file from the `biolink_model.yaml` put in `…
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originally "[Publishing plant phenotypic data](https://faircookbook.elixir-europe.org/content/recipes/reusability/plant-pheno-data-publication.html)" is now shared "Registering SwissLipids identifier…
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```
We would like a Jenkins report for any classes that have equivalent class
definitions that have a self-referring genus that is also a subclass of
phenotypic abnormality.
For example in HP,
Fac…
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Hello,
I used MTAG to enhance the GWAS ability. I have phenotypic data of three environments of plant hegiht which has low repeatability. We call the rep_1,rep_2,rep_3. The GWAS signials were unde…