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Thank you for this great tool!
I wanted to clarify the meaning of the p-value in netvisual_bubble when identifying signaling pathways increased in one dataset over another.
![image](https://user…
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While working on #19082 we noticed other terms relevant to small GTPases - we wonder whether those are realy signaling pathways or should be incorporated into other BPs
'small GTPase mediated sign…
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# demo
## MedAL
https://arc.net/l/quote/dizfzncf
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we have taken a basic biologic RPA to elucidate the pathophysiology of BPD bpd the CLD based on cellmolecular mechanisms of physiologic…
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Hi,
Thanks for developing this user-friendly tool.
I have problem when I run the code follow:
`netVisual_aggregate(cellchat, signaling = pathways.show, vertex.receiver = c(1,2,3,5), vertex.size…
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OTF-SOFT | Torso
OTF-SOFT, Omega-3 Marine Triglycerides Capsules are polyunsaturated fatty acids (PUFAs). involved in human physiology includes Eicosapentaenoic acid (EPA), and Docosahexaenoic ac…
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Hey, great package!
I am performing the differential analysis as described in your vignette on my own data. I'm presuming something is missing in my understanding of the outputs, but they are diffi…
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Hi, I want to use CellChat as the tutorial described in 'Brief tutorial for CellChat analysis of multiple spatially resolved transcriptomic datasets'. I got the result when set layout = "chord" in ne…
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I'm attaching some sentences where REACH is extracting that "X regulates/phosphorylates/etc EGF", where EGF (epidermal growth factor) is incorrectly identified as the object of the relation.
This m…
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**Background**:
Pathway diagrams are widely used in genomics to describe changes occurring in signaling pathways resulting from genomic alterations. There are [several tools](https://www.ncbi.nlm.n…
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molecular network that controls the decision to sexually differentiate:
the cAMP-signaling pathway,
the stress-response mitogen-activated
protein kinase (MAPK) cascade,
the pheromone signaling p…