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For the second half of the week, I am looking more into biosensors.
This paper is very oriented towards chemistry and electronics but I believe is of value. It gives insight on a different type of bi…
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. @chunyuma requested:
> Hi Steve,
>
> Can I know where we access the relationship of DRUGBANK IDs and use them in the KG2? I’m asking this because However, I can’t use their API for this goal b…
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Hello,
Can you provide more info in terms of how to make predictions given a new pegRNA?
The code provided here needs a feature matrix, however, the code is missing to convert a raw DNA sequence…
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If I am subsetting my data by taxonomy (bacteria) should I be rescaling the tpm data or leaving it?
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Hi developers,
Thank you for the fantastic work. It has been really helpful. Now I've made over 10 analysis, the add rev_decoy and contaminants function has been working properly. This time when I…
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Hi,
tanks for this package!
I was replicating your example and I got an error in the last step when I call find_motifs.py
Traceback (most recent call last):
File "DNABERT/motif/find_motifs.py"…
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Hi Benj,
I am wondering why I am losing such a big amount of reads after the merging.
For the analysis, I used a workstation with an i7-9th generation processor,32gb of ram, and Ubuntu 20.04, and …
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Hi Meren et al.
Firstly, thanks for your work with MED. I've been using it for a couple of years now with SymPortal (symportal.org). In particular I find that it keeps sequeneces that I know to be …
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Hi, here are two examples of reads that vsearch (v2.15.1_linux_x86_64) don't merge, even if alignment seems to be evident. They come from real ITS amplicon sequencing data.
```
vsearch --threads …
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Hi,
I am repeating here a comment I wrote to another issue #1194 yesterday (sorry if this is annoying!)
I am adding here some better description and more information.
I have a 16S amplicon dataset…