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duplicate of https://github.com/ebi-ait/hca-ebi-wrangler-central/issues/139#issuecomment-778602403
from Ray's comments:
```
1. I have downloaded the fastq data files from the `hca-util` s3 bucket.
2…
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**Dataset/group this task is for:**
GSE146639_SingleCellsAlzheimers
Google sheet: https://docs.google.com/spreadsheets/d/1RCyALU0J38R8efXGV5mzVlIATNjZNx0M/edit#gid=2106444307
Ingest: https://co…
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**Mondo term (ID and Label)**
'autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome' (MONDO:0014558)
**Synonym to be added**
KAT6A Syndrome
**Synonym subt…
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Proposal for how to order and orient the contigs in our assemblies.
While working on two problems (annotating fragmented assemblies and annotating the whole assembly with the Pfam CoV models), I re…
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Hi,
I have been running prokka on a coronavirus genome, using a protein set.
For one of the proteins, the start codon predicted is wrong. It is not using the normal ATG but a GTG located 2 codons …
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#### What analysis module should be updated and why?
[tp53_nf1_score](https://github.com/AlexsLemonade/OpenPBTA-analysis/tree/master/analyses/tp53_nf1_score) was never fully completed because of …
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`git shortlog --summary --numbered` reports:
```
746 C. Titus Brown
94 Luiz Irber
34 Laurent Gautier
17 Tim Head
7 Connor Tiffany
5 Olga Botvinnik
4 Tayl…
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Related to #69 .
One of the modifiers for inheritance that the VCI uses is "Genetic Anticipation". It has an HPO code, and it descends directly from mode of inheritance. Genetic Anticipation i…
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could you tell me how to download the rds files
LFD_R1.dgecounts.rds
LFD_R2.dgecounts.rds
HFD_R1.dgecounts.rds
HFD_R2.dgecounts.rds
Best wishes
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**Brief description**
COG-UK may begin to receive samples from British Overseas Territories or Crown Dependencies. This will require an update to adm1 in order to provide the option for sequences f…