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COG-UK
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dipi-group
Data integrity and pipeline integration working group
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https://cog-uk.s3.climb.ac.uk/phylogenetics/latest/ URLs get error 443 (Connection timed out)
#213
AngieHinrichs
closed
1 month ago
5
"null" country in some INSDC submissions
#212
AngieHinrichs
closed
9 months ago
10
S3 files not updated in several days
#211
AngieHinrichs
closed
1 year ago
2
Download files not updated since 2022-07-19
#210
AngieHinrichs
closed
2 years ago
2
download files not updated since 2022-05-09
#209
AngieHinrichs
closed
2 years ago
1
ENA has "United Kingdom:null" as Country for at least 84 seqs
#208
AngieHinrichs
closed
2 years ago
5
BA.1* PHEC sequences with runs of SNVs and/or indels in ranges 27200-27216 and/or 28478-28495
#207
AngieHinrichs
closed
2 years ago
3
[manualpipe] Asklepian 20220407
#206
BioWilko
closed
2 years ago
0
Download files not updated in the past few days
#205
AngieHinrichs
closed
2 years ago
3
[manualpipe] Gisaid 20220314
#204
BioWilko
closed
2 years ago
0
Add minutes 28-2022-03-09
#203
SamStudio8
closed
2 years ago
0
[manualpipe] Elan-publish 20220308
#202
BioWilko
closed
2 years ago
1
[manualpipe] Elan 20220307
#201
BioWilko
closed
2 years ago
1
[manualpipe] Asklepian 20220306
#200
SamStudio8
closed
2 years ago
2
PHE1 MDV performance
#199
SamStudio8
closed
2 years ago
2
[manualpipe] Elan 20220306
#198
BioWilko
closed
2 years ago
1
[manualpipe] Elan 20220304
#197
BioWilko
closed
2 years ago
0
[manualpipe] Gisaid 2022-02-28
#196
BioWilko
closed
2 years ago
1
Asklepian performance
#195
SamStudio8
closed
2 years ago
4
[manualpipe] GISAID 20220225
#194
SamStudio8
closed
2 years ago
0
Unlinked libraries in Majora
#193
SamStudio8
closed
2 years ago
12
[manualpipe] Asklepian 20220224 / 22k DHSC genomes missing from Asklepian
#192
SamStudio8
closed
2 years ago
17
[manualpipe] dipi44 20220220
#191
SamStudio8
closed
2 years ago
1
[manualpipe] Asklepian 20220220
#190
SamStudio8
closed
2 years ago
4
[manualpipe] Elan 20220219
#189
BioWilko
closed
2 years ago
9
[manualpipe] Asklepian 20220217
#188
SamStudio8
closed
2 years ago
0
[manualpipe] Elan 20220216
#187
SamStudio8
closed
2 years ago
6
[manualpipe] Asklepian 20220215
#186
BioWilko
closed
2 years ago
3
Add meetings 25-27
#185
SamStudio8
closed
2 years ago
0
[manualpipe] Elan 20220128
#184
SamStudio8
closed
2 years ago
4
Race condition in Majora add MAG
#183
SamStudio8
closed
2 years ago
2
[manualpipe] ENA BAM 20220113
#182
SamStudio8
closed
2 years ago
3
[manualpipe] status-generator 20220107 - 20220110
#181
SamStudio8
closed
2 years ago
1
fasta in https://cog-uk.s3.climb.ac.uk/phylogenetics/latest/ -- xz compression?
#180
AngieHinrichs
closed
2 years ago
4
Genomes from Elan 20220105 have been unpublished
#179
SamStudio8
closed
2 years ago
12
[manualpipe] Asklepian 20220105
#178
BioWilko
closed
2 years ago
17
[manualpipe] Elan QC 20220104
#177
BioWilko
closed
2 years ago
0
[manualpipe] Asklepian 20211220
#176
SamStudio8
closed
2 years ago
3
Collection date of B.1.1.7 sequences PHEC-U303UC24 and PHEC-U303UC33
#175
AngieHinrichs
closed
2 years ago
1
[manualpipe] ENA BAM 20211208
#174
SamStudio8
closed
2 years ago
0
[manualpipe] Elan 20211210
#173
SamStudio8
closed
2 years ago
0
Metadata file seems incomplete
#172
Jeltje
closed
2 years ago
3
Switch NXF_WORK after next BAM pipe
#171
SamStudio8
closed
2 years ago
0
[manualpipe] Dipi44 20211208
#170
tombch
closed
2 years ago
0
[manualpipe] ENA BAM 20211206
#169
SamStudio8
closed
2 years ago
1
Update #Inbound-distribution slack messages
#168
BioWilko
closed
2 years ago
1
[manualpipe] GISAID 20211129
#167
SamStudio8
closed
2 years ago
2
[manualpipe] ENA BAM 20211129
#166
SamStudio8
closed
2 years ago
0
[manualpipe] ENA BAM 20211122
#165
SamStudio8
closed
2 years ago
5
Shard the published artifact directories
#164
SamStudio8
closed
2 years ago
6
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