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Hi!
I'm unable to pass my precalculated phenotype variant estimates:
```sh
> pwcoco-master/build/pwcoco \
--bfile plinkout \
--sum_stats1 exposure \
--sum_stats2 outcome \
-…
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## Goal:
- What proportion of variants and which ones show a signal relative to their WT?
## Basic Analysis using mean profiles:
- Using correlation coefficients (by Marzieh)
- [x] Replica…
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These might come in the OMIM migration files, but OMIM noted these new phenotypic series (we'll probably need to split some terms):
- [x] [PS182960 Neuronopathy, distal hereditary motor, autosomal …
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Hi,
in Finland, clinical geneticists have specific questions related to undiagnosed rare diseases.
If there is no ORPHAcode (disorder), is it meaningful to use many different group codes for dif…
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(Aka, second iteration of https://github.com/neurobagel/project/issues/145)
To populate a new MNI node(s), we need to generate new versions of the JSON-LD files for the PPMI and QPN that reflect th…
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I advocate to remove all UMLS:CN* cross references from Mondo as they falsely suggest that they are UMLS cross references - they are not! Neither will they ever resolve anywhere. UMLS:CN* cross-refere…
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Hi! Thanks for so many elegant packages.
`plot_gcn` is written based on ggplot2.
Have you considered generating the r object directly instead of returning a plot?
Best !
WWz33 updated
8 months ago
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BIOGRID are changing the way that genetic interactions are described
I'm trying to make a plan (no hurry to implement, might take 2 years, but there might be small changes we could make to curati…
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We have experimental evidence for the MF of a gene product from siRNA treatment. Which ECO are you using for this now? It's not really direct and it's not a mutant phenotype as the construct or native…
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So, Val and I think some terms need to be obsoleted in the ontology.
We started talking about it when I requested a long precomposed BP to describe fep1. Fep1 is a DNA binding transcriptional repres…