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Between 8am and 4pm PT, on July 4th, the ontology build started to fail, bringing down or blocking multiple pipelines. Looking at the PRs in that window, I suspect the changes happened earlier, but to…
kltm updated
2 months ago
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Hi developer!
Glad to meet such a convenience tool for AS!
I have a probem in psiPerEvent:
When I type `suppa.py psiPerEvent `
It shows that
`ERROR:psiCalculator:transcript rna-XM_025824875.2 no…
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Lims Issue
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**Work Flow:** TWIST v7 and RNA v3
**Protocol:** Library Validation QC TWIST (post norm) and Library Validation QC RNA (post norm)
**Step:** Quantit QC (Library Valida…
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Pseudogenes
rRNA
tRNA
miRNA
ncRNA
see tbl format spec here: http://www.ncbi.nlm.nih.gov/genbank/genomesubmit_annotation
see GFF3 format spec here: http://www.sequenceontology.org/resources/gff3.html
…
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The HELM string `RNA1{R([NC1=NC(N([*:1])C=C1)=O])P}$$$$` is valid and is accepted by the webeditor. Some of these calculations give errors incorrectly and some errors are not descriptive, and only sho…
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I tried to run the Identify_Markers command, but the following error has occurred.
> hs_marker
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input sequence -- human transcriptome
```
curl -JLO https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/GCF_000001405.40_GRCh38.p14/GCF_000001405.40_GRCh38.p14_rna.fna.gz
```
command run:
…
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Hi,
Thank you for creating Seurat-disk.
I am running in the following error:
obj
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Hello L_RNA_scaffolder users,
I am trying to use the program, but I can't manage to validate the input. I have my fasta file and my blat-generated psl (noHead) files. Perl, bioperl and C++ (gcc / c…
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Artem
- [x] Create a 'generic' template page for RPS/RPL genes
- [x] Population generic templates page with links to external databases
- [x] Create a 'useful links' page with ribosome/RNA modifica…