-
I'm seeing a weird bug in in my CAGEfightR package when trying to import BigWigFiles.
Here's a reproducible example:
```
# Load the example data
library(BiocParallel)
library(rtracklayer)
l…
-
I don't know if this is a bug in some sort or if I'm overlooking something, but this baffled @ja-thomas and me a bit this morning.
Consider a simple case where you have a missing value somewhere in y…
-
Hello,
I encountered an issue, that in some cases, the difference between the count of events gated in FlowJo and the count of events calculated by your packages (checking with `gh_pop_compare_stat…
-
I was able to successfully install R, but when I try to install R-essentials using conda at command prompt:
```
conda install -c r r-essentials
```
I get the following error:
```
C:\Windows>ech…
-
Problem:
Unfortunately, the column name of the output of the default `predict`-function for `mlr3` `LearnerRegr` is rather messy.
Example:
```
> library("mlr3")
> library("rpart")
> library…
-
gds_path
-
The objective is to have a flexible system for creating propensity scores that can be used to calculate the pMSE ratio, discriminator AUC, and SPECKS. The system should be more flexible that the curre…
-
Hi,
I just looked at the wrapper to call susie_rss().
Even though you add **n** as an argument to **susie_args** list, , and this should be properly passed to the do.call function wrapping susie…
-
Hello Claudia,
I am finding that many of the p-values for edge or node centrality comparisons are whole numbers, either zeros or 1s. Is there a way to have the actual p-value in the out put and sho…
-
Hi,
I have followed the ASpli tutorial from: https://rdrr.io/bioc/ASpli/src/inst/doc/ASpli.R and ran the commands (the ones that weren't commented out), although, when I try to visualize the altern…