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Hi,
I'm trying to update the Debian package of pftools3. Unfortunately some of the tests are failing:
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /bui…
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Do you need to create databases or is there a better option?
I created a database for copepods:
```
makeblastdb -in ../blastpacope/genomas_copepods/ncbi_dataset/data/db_all_copepods.fna -dbtype…
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In GitLab by @peterdesmet on Aug 7, 2020, 11:12
Currently [`observations.csv`](https://gitlab.com/oscf/camtrap-package-schemas/-/blob/master/observations-table-schema.json) contains observations and …
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To better evaluate read hits to the reference genomes, we need to have a quality, consistent annotation of those genomes, to see where the reads are hitting, and whether they are significant.
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A PomBase community curator, Matt Whitby, has requested two new terms for PMID:30667359:
1. negative regulation of template switch recombination
For this one, I suggest:
name: negative regula…
mah11 updated
3 years ago
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Hi,
In the newest release I noticed the script
`agat_sp_flag_premature_stop_codons.pl`
Running this on my gff and genome file resulted in 0 cases of mRNAs containing premature stop codons, and …
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Hi,
When I try to train a language model with UniRep I get the following error:
"RuntimeError: shape '[-1,26]' is invalid for input of size 2800"
Looking at the UniRepForLM Class, it says in a…
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https://mp.weixin.qq.com/s/4-SUn7JGbnWlR4N5ekebtQ
ixxmu updated
3 years ago
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Hi,
I have analyzed a simple data by command:
`/SGRNJ03/randd/zhouxin/software/TRUST4/run-trust4 -t 10 -u ./NJU_Pt_2_2_3Nlib/r2.fq --barcode ./NJU_Pt_2_2_3Nlib/r1.fq --barcodeRange 0 23 + -f /SGRN…
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Hi,
I executed the following commands:
nucmer --maxmatch -c 100 -b 500 -l 500 -L 5000 refgenome qrygenome …