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Currently the `bin/compile` script contains a fair amount of additional output (eg lots of `ls -al` calls, and debugging `echo`s) that is presumably leftover from testing/development:
https://githu…
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While running `./INSTALL.pl` I get the following out:
```bash
Formating sequences ...
BLAST Database creation error: Near line 171195, there's a line that doesn't look like plausible data, but it…
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We need to find someone to implement this.
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---
Author Name: **Keith Robison** (Keith Robison)
Original Redmine Issue: 3292, https://redmine.open-bio.org/issues/3292
Original Date: 2011-09-20
Original Assignee: Bioperl Guts
---
The code belo…
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RustPython is relatively mature now.
https://github.com/RustPython/RustPython
Please add it to the install list.
It is easy to build.
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give a short description of what it is, what it does, and any limitations (e.g. what's the biggest dataset people should think of using, roughly how long will it take, etc).
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```
a = [1, "asdf", 2.0]
a[0] = 4
print a[0]
```
Unfortunately sometimes folks use small lists when they really should be using tuples, so the above code doesn't work.
However, these can be …
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Hi, I try to generate noepeptide using this pipeline recently but encounter some difficulties.
firstly, I successfully run this pipeline with both somatic and germline variant which called by vars…
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Dear Alexander,
Excellent pipeline! RASCL allows me to easily set up selection pressure analysis for each of genes of SARS-CoV-2.
However, I met such issue in conserved genes (e.g. nonstructural…
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https://bioentity.link//#/publication/10.1093/g3journal/jkae094