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Hi
I'm trying to create a new subject (i.e. analogous to 'S1' that comes with pycortex) using the S1200 HCP subject. I have the flat, pial, white, and inflated surfaces for L/R hemispheres, and th…
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Integrate the JunaChimp Template and DaVi parcellation for chimpanzee mapping and cross species comparison into mamapype
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Hi everyone! I have been trying to use the python package resector (https://github.com/fepegar/resector), description: Implementation of a TorchIO transform used to simulate a resection cavity from a …
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Since abagen v0.1 we natively support surface atlases, so there's no need to project surface parcellations to volumetric space before passing them through to `abagen.get_expression_data()`. I'd be hap…
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from etienne:
```
ImportError Traceback (most recent call last)
in
----> 1 import siibra
2 siibra.logger.setLevel('INFO')
3 siibra.__version__
/r…
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Hi Robert,
I'm feeling dumb here. The summary is, I ran the preproc level with no issue, but at the participant level, the container cannot find the relevant data. I've tried specifying the session…
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Hi, I am trying to plot macaque's brain and its ROI with the data from [here].(https://scalablebrainatlas.incf.org/macaque/MERetal14) Also, the brain atlas exists in this [example](http://visbrain.org…
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Hello @faskowit ,
First of all I've been really impressed by your tool and until now, it has performed flawlessly on my data. However, today I begun to launch it on my 39 subjects cohort (one by on…
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hash/version: e155a16beebdef9b5ca0219168ba0a0c7b255a8e
to reproduce:
```python
import siibra as sb
atlas=sb.atlases.MULTILEVEL_HUMAN_ATLAS
assert atlas.selected_region is None
```
expected…
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Hi. I am trying to visualize the Gordon 2016 parcellation with plot_markers. I can get view_markers to produce an accurate image:
![newplot](https://user-images.githubusercontent.com/5094574/113948…