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```r
CMK_fc
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I've run into issues with displaying a simple plotly output in shiny when I install the latest tidyverse (1.3.2). The issue does not appear with tidyverse 1.3.1, or if I do not install tidyverse.
I…
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Dear Group,
i would like to discuss and mention a specific problem that i have encoutered regarding the download/preprocess of specific RNA-Seq data from TCGAbiolinks:
# for the TCGA-COAD RNA-Se…
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Hi! Thanks for developing CBNplot! I just want reproduce the documentation of CBNplot, but some codes cannot running successfully in Win10. By the way, could you share the file, _tcgablcaData.rda_? or…
Ci-TJ updated
2 years ago
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I am contacting you because I am following the CNVRanger manual called "Summarization and quantitative trait analysis of CNV ranges" but I am unable to complete the final GWAS.
The problem is:
…
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Hi I got this error running
```
SaveH5Seurat(Plasticity_spatial, overwrite = TRUE)
```
```
Creating h5Seurat file for version 3.1.5.9900
Adding counts for Spatial
Adding data for Spatial
…
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Hi Sam,
i get an error while runnning MetaspotsByGroups. It used to work fine but I have recently been getting this error
Error in `as.Graph()`:
! Please provide rownames to the matrix before …
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**Otherwise**
I am trying to run MAST with a full single-cell dataset of multiple identified CD8 cell subtypes, one condition with two factors, and two timepoints. I am trying to run everything in on…
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Hey @igordot , hope all is well with you!
My colleagues and I noticed something odd in the *Canis lupus familiaris* orthologs in `orthogene`, and I traced it back to `babelgene`. See here for the f…
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I am using the enrichKEGG function, but my code, that was working last week does not work anymore.
Also the example in the vignette doesn't work anymore:
data(geneList, package="DOSE") #Vignette …