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I think it is necessary to provide definitions of terms used within V3 (and V1.3) and correlate to related and competing definitions. This is probably best added to the glossary when time to reorganiz…
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Hi,
What parameters do you suggest changing when working on Illumina short-amplicon reads of COI genes?
For example, would you:
- `SelfConsist = TRUE` instead of proving 16 × 41 Transition prob…
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Hi,
I am hoping to agglomerate my phyloseq object by phylum. I have done this with other phyloseq objects and had no issues but when I try agglomerate based on "Phylum" taxonomic rank it returns t…
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Need to agree on a structure of the rules i.e. `/v6/java/6.2.5.yaml` or `/java/v6/6.2.5.yaml` or `/v6/6.2.5/java/rule.yaml`
I think it makes sense to maybe go with language first? What will people…
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Hello,
First, my obligatory brown-nosing: I love phyloseq and have been getting pretty intimate with it the past week. I've been trying to transition over to using R for my informatics work because …
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The image at https://lsstdesc.org/RESSPECT/ (which is pulled from the readme) is broken. We need to copy over the image when constructing that webpage (which happens in `.github/workflows/asv-main.yml…
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ASVS - 5.1.3 verification requirement is:
`Verify that all input (HTML form fields, REST requests, URL parameters, HTTP headers, cookies, batch files, RSS feeds, etc) is validated using positive va…
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Hello
tried abline function and geom_hline function to draw a line but didn't work.
any suggestion?
```
p
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### We would like to learn about your use case. For example, if this feature is needed to adopt Narwhals in an open source project, could you please enter the link to it below?
_No response_
### P…
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When using cityblock, we won't have to do what's happening here:
https://github.com/jsevo/taxumap/blob/61165d1f879fee4bab359597bcd63f494dd7b6ce/taxumap/tools.py#L20
The distances can be calculat…
jsevo updated
2 years ago