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It would be nice to use newer versions of `robot`, but...
In #206, I saw that versions of `robot` newer than v1.8.3 appeared to break the transformation process, at least with BFO in the tests.
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Mostly looks great! Feel free to close if these comments not helpful or in the wrong place
## generalizability
This schema generalizes to most ontologies, I don't know if you intend to replicate…
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Discussed on managers call https://github.com/geneontology/pipeline/issues/300
A statistic that is very useful for GO is the number of genes that are not mapped to the reference proteome *for which…
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I'm trying to validate this file:
[bug.owl.txt](https://github.com/iovka/shex-java/files/4206537/bug.owl.txt)
Using the following shape map and schema. (Remove the .txt from everything for typica…
goodb updated
4 years ago
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Steroid esterification and children are all single steps; See this ticket.
obsoletion, sterol esterification terms #19255
https://docs.google.com/spreadsheets/d/1nvfCX3MejcsA_OuUFH113Xlc8MOpoRB7Z…
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https://github.com/geneontology/go-annotation/issues/3454
any regulation of response is weird. Recommend obsoletion.
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Every one of these results says "in Ontobee". This is first of all redundant and make it harder to read and second I am unclear as to what it should mean.
In addition, I see that the links are still …
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There are some redundant edges added to models upon import:
Example from [YeastPathwa…
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Please provide as much information as you can:
* **GO term ID and Label**
GO:0016231 beta-N-acetylglucosaminidase activity (21 EXP annotations)
GO:0102148 N-acetyl-beta-D-galactosaminidase activi…
sjm41 updated
6 months ago
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We have some relations in go-edit/go-plus
```
id: GO:0005741
name: mitochondrial outer membrane
namespace: cellular_component
def: "The outer, i.e. cytoplasm-facing, lipid bilayer of the mitoch…