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I see a crash in scm_call_n once in a while (called from scm_public_ref, which is called from Eval) and was wondering if the thread-model of guile maybe collides with the goroutines of go? I can't rep…
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THe github action for pipeline testing fails because of a problem with singularity:
https://github.com/bio-raum/FooDMe2/actions/runs/10285596571/job/28464249170?pr=47
```
Pulling Singularity imag…
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Our organizations have an `employerIdentificationNumber` attribute. This was a naming mistake -- EIN is a [US-specific thing](https://en.wikipedia.org/wiki/Employer_Identification_Number) whereas `ta…
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Hi Brian,
I am trying to run "analyze_blastPlus_tophit_coverage.pl" with my assembled transcriptome on a Linux machine (trinityrnaseq-v2.14.0).
After generating the blastx database and running t…
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hi, when i processed my taxonomy data, i wanted to merge two datasets by a specific column match. so i used the csvtk grep command as following :
cat NCBI_seqid_taxid.txt | csvtk -t grep -f accessio…
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This is currently only documented in the script [`db/database-migration-002.sql` (link)](https://github.com/NESCent/FossilCalibrations/blob/ad83b6abec3f4965f5c04264c378263e1b6ce9f8/db/database-migrati…
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I'm using a sandbox acct in auth.net and sending a customerId, like so...
$response = $gateway->purchase([
...
'transactionId' => '12345',
'custom…
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I need to make a way to build the taxonomy from the NCBI base taxonomy and just have the diff. From there, build a fresh taxonomy. So:
repo changes
1) Create new diff files for `nodes.dmp` and `…
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Hello, I'm trying to download the entire Pseudomonas syringae species group fasta files. Im using the taxonomy ID 136849 but it keeos saying that there are no downloads that match this filter. The exa…
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I have some issues with completing the pipeline.
The step GA_pre_scan does not produce any files in the final_resultss folder and then the pipeline stops in the GA_split step.
can you please help m…