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- biological uses outside of the group: http://www.ncbi.nlm.nih.gov/sites/myncbi/1ruvipqAmaMkN/collections/48107393/public/
- tools building on khmer concepts: http://www.ncbi.nlm.nih.gov/sites/myncbi…
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it is
The synthesis of either RNA on a template of DNA or DNA on a template of RNA.
should transcription include reverse transcription?
at one point, I think transcription used to be an RNA metaboli…
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While using the extract method from CompoundLocation.extract(), there is no check for the strand of the sequence. As a result, all sequences on the reverse strand are concatenated in the wrong order, …
kehey updated
9 years ago
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Talked with @colindiesh . . .. the JBrowseDataServlet can simply use ?data= for a particular genome. So, now we need to link (in thd database) Genomes to directory files. Not sure if that is a config …
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There is a new term cellular transcription, child of transcription,
how come?
I have direct annotations to this term, even though I know I have never used it.
What is non-cellular transcription?
In …
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Doug
I wanted to check if you are developing code to handle metagenomic samples where there are a mixture of organisms with different translation tables?
Torsten
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Hi,
Recently I tried to assemble several BAC clones one by one. All clones were sequenced by Hiseq2000.
At first, I mapped all reads to BAC and E. coli genome sequences and resultant bam files consis…
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Hi.
I'm a microbiologist starting on bioinformatics. So... really, really naive in what concerns Linux.
I'm working with Ubuntu 12.04 and I have just installed harvest (following the instructions for…
pmsim updated
9 years ago
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So I'm testing your pipeline on some new stuff. I got it to run successfully with Chik a full genome virus like Dengue. I am trying to run it against another segmented virus and it failed:
my command…
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Figure 9: I could not understand this (granted, I am not a phylogeneticist). But, something seems wrong here. How can we compare PB1-PB1 TMRCAs to PB1-PB2 TMRCAs when PB1 and PB2 are not homologous? I…