-
# Issue Report
## Please describe the issue:
I want to correct reads.
## Steps to reproduce the issue:
```shell
cd /lizardfs/guarracino/tools/
wget -c https://cdn.oxfordnanoportal.com/softwa…
-
add support for basecalling with [Dorado](https://github.com/nanoporetech/dorado)
-
Hi,
I have a question regarding the use of an alternative mapper like graphmap for preprocessing of data fed into remora.
Basecalling/mapping with dorado, which uses minimap2 internally, with …
-
I have been trying to assemble a 10Mb genome with uncorrected nanopore data (3-4 chromosomes expected). We have a lot of data, is that the reason Flye fails at the end?
[2019-06-22 11:00:05] INFO: …
-
More of a feature request than a bug.
Currently (dorado v.0.3.1) the input for basecalling is specified as a directory of pod5/fasta5 files. Attempting to point to a file errors out:
[error] f…
-
Hi,
looks interesting. Is there any reason it could not handle nanopore data, eg output from modbam2bed ?
https://github.com/epi2me-labs/modbam2bed
We typically convert the output into bedg / b…
-
Is there a Dorado model that can be used with Medaka? I can't seem to find a suitable model.
Thanks.
-
Hello community,
I am quite new to bioinformatics in general and I am now in the process of basecalling with Dorado, I manage to install the latest version of it through the command line, but when …
-
I wanted to provide some performance metrics for someone who is running dorado on Windows 11 eigher using the Windows binaries (.exe) vs the Linux binaries under the WSL
My GPU is limited to 6GB o…
-
How do we know the corresponding Dorado standalone version that corresponds to a particular Dorado server version? For instance, when Dorado server v7.2.13, how do we deduce the Dorado standalone vers…