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Dear dr. Callahan,
Though my question might somewhat fit the theme of open issue #1194, it concerns a different issue I encountered. In case you would prefer to address this question within issue #…
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Hi @dankelley and @richardsc,
### Short summary of problem
I've successfully created a CTD object using `as.ctd()`. Now I would like to add nutrient data that has been measured at distinct water d…
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**User story:**
As a single cell researcher interested in HCA relevant data, I want to understand the source and selection of the projects on this page, so that I know how they differ to other simila…
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- `plot(, type = "h")` _just_ works for centroided data
- `ggplot2` is nice to further customise the plot afterwards
- Or, possible, have an option to defined which plotting system to use.
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Received from Claude Nozeres, more assignments we can build out and refine for future iterations:
> I had some thoughts about the tools to explore errors. So far, we use these to clean up data. But…
jdpye updated
3 years ago
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Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
https://link.springer.com/article/10.1007%2FBF00160154
"There have been many attem…
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Hi pgap developers, I would like to know if its possible to annotate a sequence using a dowloaded genebank file instead of the pgap default database?
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It is said that hindsight is 20/20 and I'm not sure that I see that clearly, but given the expansion of the AIRR Data Model, some flaws are becoming apparent. Here's your chance to pile on!
What di…
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We need to write an explicit gff3 specification for our transcriptome gff3, with code to test this added to `check_gff_fasta.py`. Making transcriptome annotations compatible is the key to bringing in …
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### Setup
I am reporting a problem with Biopython version, Python version, and operating
system as follows:
```python
import sys; print(sys.version)
import platform; print(platform.python_imp…