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The Flux simulator seems to not respect the _effective length_ of transcripts during it's simulation. This means that quantification tools that "correctly" adjust for effective length will be penaliz…
rob-p updated
8 years ago
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It was suggested during the authors' review of the mirGFF3 paper that the mirGFF3 file should have the annotation database used for the initial step of detection, annotation, and quantification as man…
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Hi, it would be great to have a working example snippet
on how to connect RAMclustR output to MetFamily.
What we need is an MSP file that looks like this:
https://raw.githubusercontent.com/ipb-…
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**Describe the bug**
Hello,
I am currently using MaxQuant for data analysis and have encountered an issue after updating from version 2.0.3.0 to 2.5.2.0. Previously, the Peptides.txt file used to …
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### Problem
When I try to activate the centroid rendering (OR-mode / pie-chart), I see an error [on this line](https://github.com/labsyspharm/minerva_analysis/blob/b44fe4f82f266cb97ea2a05105dcf8c6d…
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Realizing negation-as-failure is currently realized by chaining two or three built-ins, i.e., `log:semantics` (`log:conclusions`) `log:notIncludes`. See [here ](https://github.com/w3c/N3/blob/master/f…
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Hello, we have done a Source-Free compression training function, and the benefits of YOLOv7 are as follows. I want to submit a PR, is it ok?
| model | method | input size | mAPval 0.5:0.95 | predic…
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Hi Eric,
I have started to see the following error with regard the MySQL database
…
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I have been using the DIA_SpecLib_Quant workflow for GPF-DIA data in FragPipe recently, largely without changes other than specifying expected mass shifts. Everything seems to work fine, except when i…
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If we could solve the issue 17, the number of ontersections between a point
grid and the objects could be used in order to calculate the coefficient of
error of this estimate produced by using the…