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cbroeckl
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RAMClustR
Assigning precursor-product ion relationships in indiscriminant MS/MS data
MIT License
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#53
Slycopersicum
opened
6 months ago
0
unable to find an inherited method for function ‘featureDefinitions’ for signature ‘"xcmsSet"’
#52
priyanka-1802
opened
8 months ago
2
Error: unused argument (fftempdir = fftempdir)
#51
brooklynnrm
closed
11 months ago
8
Error in define_samples(ramclustObj, blank.tag)
#50
arpita-007
closed
1 week ago
3
Create LICENSE
#49
hechth
closed
5 months ago
1
Different results with latest InterpretMSSpectrum
#48
rickhelmus
opened
1 year ago
7
PrecursorMz
#47
Slycopersicum
closed
6 months ago
11
add license
#46
hechth
closed
5 months ago
2
general function organization
#45
cbroeckl
opened
1 year ago
2
Bug fixes
#44
zargham-ahmad
closed
1 year ago
1
Check list of dependencies and possible remove outdated ones
#43
hechth
opened
1 year ago
1
Prepared everything for CRAN submission and fixed blocksize issue.
#42
hechth
closed
1 year ago
1
Possible future developments
#41
hechth
opened
1 year ago
0
Fix edge case where number of features coincides with block size
#40
hechth
closed
1 year ago
0
Refactored `ramclustR.R` and added a `sample_names` attribute to the `ramclustObj`.
#39
hechth
closed
1 year ago
0
How to handle missing `MSMS` data
#38
hechth
opened
1 year ago
2
extract function to check input arguments
#37
hechth
closed
1 year ago
0
extract function to init replacing with NA functionality
#36
hechth
closed
1 year ago
0
extract duplicate code in defineExperiment.R
#35
hechth
closed
1 year ago
0
Remove duplicate code in de
#34
hechth
closed
1 year ago
0
Implement `rc.get.csv.data` function
#33
hechth
closed
1 year ago
0
where collapse option variables are used ?
#32
jsaintvanne
closed
1 year ago
5
Can't find my sample names
#31
jsaintvanne
opened
1 year ago
5
Implement a test case using individual steps to build the whole `ramclust.R` workflow
#30
hechth
closed
1 year ago
6
Refactor main ramclust.R function
#29
hechth
closed
1 year ago
33
Question about why MSMS spectra don't read in
#28
eterlova
closed
1 year ago
9
Fix: properly check if column is already defined
#27
rickhelmus
closed
2 years ago
3
Added example to ramclustr function
#26
hechth
closed
2 years ago
0
Update to 1.2.4
#25
hechth
closed
2 years ago
0
Organize dependencies
#24
hechth
closed
2 years ago
0
Fix failing tests on Mac M1 chips
#23
maximskorik
closed
2 years ago
0
Applied spell check
#22
hechth
closed
2 years ago
0
Updated tests to be smaller and moved dependency on MSnbase to suggests
#21
hechth
closed
2 years ago
0
Support large feature tables
#20
xtrojak
closed
2 years ago
9
RAMClustR fails if run on large feature table.
#19
hechth
closed
2 years ago
4
suspected write problem in RAMClustR::write.msp
#18
martenson
closed
3 years ago
7
exportDataset function fails due to `getData` function not being found
#17
hechth
closed
2 years ago
2
Make RAMClustR available on CRAN
#16
martenson
closed
3 years ago
5
Moving over from xcms issue #430
#15
Phylloxera
closed
1 year ago
7
Where would real msms.csv data come from for MSe/bbCID?
#14
chambm
opened
5 years ago
2
Connecting RAMclustR with MetFamily
#13
sneumann
opened
5 years ago
5
temp2 object not found
#12
rickhelmus
closed
5 years ago
9
object 'tmpnames1' not found
#11
rickhelmus
closed
6 years ago
2
RAMClustR is moving house
#10
sneumann
closed
1 year ago
0
No disk space while calling "ff" in ramclustR.R:263
#9
tsufz
closed
6 years ago
1
Error running the vignette
#8
sneumann
closed
6 years ago
5
Master
#7
cbroeckl
closed
7 years ago
0
can't sync local version to github
#6
cbroeckl
closed
8 years ago
0
Run error in RAMClustR
#5
dwalke04
closed
6 years ago
8
mzpos and timepos are unused
#4
sneumann
closed
6 years ago
1
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