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Hi Mark,
I got this error:
`Not enough memory! User limited to 429496729600 bytes but we only have 269441224704 bytes.`
I tried to restart the job by setting less memory `--defaultMemory`, bu…
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First of all I love your package. It is the perfect tool to work with all kind of image files in python. I use it so often and I am so glad that you put in the effort to create and maintain such a won…
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### Describe the Bug
[bioio-tifffile](https://github.com/bioio-devs/bioio-tifffile) takes precedence over [bioio-ome-tiff](https://https://github.com/bioio-devs/bioio-ome-tiff) even for `om…
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Doing some basic alignments (just 2 10x genomes). Actually two genomes from the same species so, should be straighforward.
I'm not sure what this error is indicating, I've not seen this before in p…
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hi, glenn,
i think when i started again, the installation got completed.
I changed the sed command to:
sed -i 's/git:/https:/g' .gitmodules as 'git' is in the file name too and it owuld cause a mess.…
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Hi, we recently migrated from `aicsimageio` to `bioio` at https://github.com/multiview-stitcher/multiview-stitcher and realised `bioio-czi` has a requirement for
https://github.com/bioio-devs/bioio…
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### Feature Description
The `bioio` repository should point to/link to/reference/copy documentation for the readers.
### Use Case
The `bioio-ome-zarr` reader has the following documentation i…
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### Describe the Bug
Found while working on understanding #55 (#54): Some reader metadata files include leading `.` while others do not. This results in our plugin cache having duplicate en…
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I ran toil-cwl-runner on HPC and gave input parameters, --tmpdir-prefix, --defaultCores, --defaultDisk, and --defaultMem but it seemed it didn't work.
the temporary directory didn't changed and the co…
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Just curious. I think this may be the third time we have this code in multiple places? (Base) TiffReader, this one, and somewhere else?? Should we centralize this to a standard function …