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For methods to support for multimodal modeling we should support:
- [ ] No Fusion approach: Contrastive workflows between modalities where a single embedding is generated for each modality (and/or te…
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### Description
Hi,
I am working with tumor only vcf files generated by Balsamic from different versions. To be precise I am using `SNV.somatic.xxx.vardict.clinical.filtered.pass.vcf` files. It co…
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We are trying to import coadread_cass_2020 into our private installation of cbioportal and getting this error
ERROR: data_clinical_patient.txt: lines [74, 108]: columns [18, 19]: Value of numeric a…
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## Description
When user clicks on Download button, file name has wrong date and missing tab name
Eg: BHAVIK-CA_Clinical_Data_20231030
[Private Zenhub Image](https://api.zenhub.com/attachedFiles/eyJ…
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Create the list of the order of documents to fill in. this should follow the Design and development SOP to start with, with other QMS SOP following.
**Order to fill out Templates**
1. Literature …
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As a production user,
I want a feature to get all sample internal ids for the cases I have selected in the trailblazer analysis view,
So that my workflow of delivering samples in lims can be str…
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I am encountering an issue while attempting to  using Clinica. The command I am running is:
clinica con…
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Discussion thread for page: https://phenopackets-analysis.readthedocs.io/en/latest/domain-entities/clinical-findings.html
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Copy theme editing controls from clinical-support-forum into clinical:themes package.
https://github.com/awatson1978/clinical-support-forum
https://github.com/awatson1978/clinical-support-forum/tree/…
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**Run the follow code:**
test_adata=adata[adata.obs['cell_type'].isin(['CD4 T cells'])]
dds=ov.bulk.pyDEG(test_adata.to_df(layer='counts').T)
dds.drop_duplicates_index()
print('... drop_duplicates…