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Hi there,
We would like to request some updates to the [acknowledgements](https://virusseq-dataportal.ca/acknowledgements).
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**Alberta:**
_Genomes with…
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Dear @4ureliek,
Thank you for all the available and resourceful scripts. I have been using parseRM and now I am playing around with TEorthology and it is making my life really easier. I would like …
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Hi Changewei,
Thank you for your work on the assembly of the mitochondrial genome!
I would like to know what coverage was used for Arabidopsis thaliana in your paper.
In Table 1, there is 191.31…
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This is regarding _Sequence Alignment/Map Format Specification_ (2022-08-22).
§ 1.3 "The header section" lists valid values for read group platforms:
> Valid values: `CAPILLARY`, `DNBSEQ` (MGI/B…
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Hi folks,
I have been attempting to load in RepeatModeler through your usual installation description and am running into this one main issue I can't figure out.
I am on a campus cluster so I'm …
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Hello,
I think the answer is yes based on the options' descriptions but I wanted to confirm this anyway. Does TrimGalore do soft clipping of the reads by default based on the given quality threshol…
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To demonstrate how well vcf-zarr works on real-world data we are going to demo on the 100,000 genomes VCFs (Genomics England project [RR1062](https://research.genomicsengland.co.uk/research-registry/b…
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### Introduction
Hi everyone! I'm Siem Eerden. I'm a PhD researcher in the Environmental Biotechnology group in the Biotechnology department. I'm originally from the Netherlands, and I live in …
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**Describe the bug**
RDF export of id is wrong
**To Reproduce**
Steps to reproduce the behavior:
1. Upload fair genomes example file
2. Export to TTL
3. See "http://purl.obolibrary.org/obo/HP…
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Hi!
With ERGA/BGE/VGP/EuroScienceGatway/... projects, there are several projects trying to deliver high quality and FAIR workflows for the annotation of genomes. Braker is a very good tool that deser…