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## Bug report
The nextflow documentation [says](https://www.nextflow.io/docs/latest/workflow.html#workflow-outputs):
> Workflow inputs are always channels by definition. If a basic data type, s…
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## Bug report
Attempting to run nextflow causes a Capsule Exception.
### Expected behavior and actual behavior
The expected bevaior would be initializing and running Nextflow. Instead, a Caps…
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## Describe the issue
I am trying to run the VEP tool in Nextflow as a docker image by specifying my own cache directory using the `--dir_cache` parameter. The directory exists outside. However, wh…
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Asking for GPU with name "Intel" causes an error in case no Intel GPU is available. In pyclesperanto_prototype it falls back to any other GPU and prints a warning.
[Code](https://github.com/clEspe…
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Some libraries found in version 23.10.1 do have vulnerabilities. They need to be updated to the following min version:
| Affected library | Severity | Min version needed |
-----------------|------…
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Im running the analysis on 14 BAM files 7 from tumor and 7 from its germline. which is in a
/mnt/d/AKU/FTP/BAM/.
I rand the following command to test the tool:
`./ximmer -v -nosim -c /mnt/d/AKU/…
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Dear all.
I tried to install/build the repo using:
`git clone https://github.com/CSBDeep/CSBDeep_fiji.git`
`cd CSBDeep_fiji`
`mvn -Denforcer.skip=true clean install`
and I am getting a Build Fail…
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### Operating System
Other Linux (please specify below)
### Other Linux
RHEL 8.7
### Workflow Version
wf-transcriptomes/1.0.0 nextflow/23.04.3
### Workflow Execution
Command line
### EPI2ME Ve…
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Open Grant Proposal:
Project Title: Cloud Sentinel
Proposal Category: Integration/Storage
Individual or Entity Name: Emmanuel Damilare Adediji
Proposer: emmYgd
Project Repo(s…
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## Bug report
The get started page states that nextflow can run with Java up to version 18. After installing Java v18 I could not run nextflow but after downgrading to v17 I could run nextflow.
…