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Hi, thanks for coming up with this useful tool.
When I conducted the model.train_df_and_spatial_deconvolution function to decompose ST data into spatially resolved single-cell transcriptomics data, …
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https://mp.weixin.qq.com/s/4W5kav6r4UcX-haQ2rv3NA
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We have to provide a text with keywords that can help the site to appear higher in searches
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Hi,
I'm calling `variancePartition::dream()` function to fit a mixed-model and I'm getting the following error:
_Error in dream(vobjDream_obj, form_model, metadata_obj, L) :
Error evaluating …
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Hi,
I'm trying to use my own spatial transcriptome data for SpaGene analysis. How do I get the location information? I don't know whether the imageow, imagecol and gene extracted in the seurat data …
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Hello,
I am trying to understand how to use bulk2space by going though the tutorials. I am currently going though the first tutorial with the PDAC datasets.
I would like to know how you generated …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/stemangiola/CuratedAtlasQueryR
Confirm the follow…
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Hello team,
I am trying to run the new [vignette](https://satijalab.org/seurat/articles/spatial_vignette_2.html) on the analysis of image-based spatial datasets but I am unable to install the corre…
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It's more a set of questions than a bug report.
I was wondering if the `score` in `obj@lrpair` provided after `find_lr_path` & `dec_cci_all` was the intra-cellular score, the inter-cellular or the…
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https://mp.weixin.qq.com/s/X8eP58iDEx4j7pSyGbze9Q