-
Supporting microbiome-specific data containers in R; in particular [_phyloseq_](https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0061217) (more widely used) and [_TreeSummarizedExperi…
-
Hi,
thanks for this great package! I am trying to use SAFE for the annotation of metadata on a low-dimensional graph representation of microbiome abundance information (similar to: https://genomebi…
-
Maternal smoking during pregnancy increases the risk of gut microbiome-associated childhood overweight and obesity – Ye Peng – Gut Microbes
https://www.tandfonline.com/doi/full/10.1080/19490976.2024.…
-
"Hey, thank you very much for this cool tool. I'm working on amplicon sequencing derived from public data with taxa at the genus level. According to the instructions, the only mandatory input is the a…
-
See #394 - @YihanLiu4023 could you have a brief look at this one?
-
Hi! I'm trying to replicate your script using your test data and I think that te PhyloseqGLMM.rds file is not working.
Can I ask If anyone can check it?
Thank you very much in advance.
-
Only microbiome data of fecal samples from different groups were used in the article to address the issue of batch effects in data integration. Can NetMoss analysis be used if it is microbiome data of…
-
Effects of removing in-feed antibiotics and zinc oxide on the taxonomy and functionality of the microbiota in post weaning pigs – Juan M. Ortiz Sanjuán – Animal Microbiome
https://animalmicrobiome.bi…
-
Hair Microbiome Diversity within and across Primate Species -- Catherine Kitrinos et al. -- ASM Journals
https://journals.asm.org/doi/10.1128/msystems.00478-22
-