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this issue is intended to collect discussions and work regarding MSStats integration
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Process EMP500 data into portal
All data is in EBI (https://www.ebi.ac.uk/ena/browser/view/PRJEB42019?show=reads)
Mark M - pull metadata from EBI -- Need to check to see if GOLD has pulled it i…
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**Describe the bug**
I tried to run the pipeline on a two mzml files, but I got the error
An exception occured running AlphaPept version 0.3.28:
File extension .mzML not understood.
I read in …
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I haven't dug into it but it looks like the mzml parser is having issues with MALDI data when it contains data from more than one spot, a file with a [single spectrum](https://massive.ucsd.edu/ProteoS…
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Hi Joshua,
By observing the processed mzML file. My glycoprofile has adducts with formate, sodium and one Rapifluor tag. For example, the glycan A2FG2 with mass 1786.65 will be 2098.82 with one tag…
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### Basic information
* My operating system:
OS Name: Microsoft Windows 11 Education Insider Preview
OS Version: 10.0.22483 N/A Build 22483
* My MZmine version…
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Hello,
I wonder if it is possible to use some sort of API to send / retrieve jobs from the Prosit server(s)? That would make my life much easier when submitting several jobs ;).
Thank you for …
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Hi,
I am trying to load mzML files with 500MB approximate size and I am constantly getting this segmentation fault error. However, when I use smaller files, this doesn't occur and my workflow runs …
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https://github.com/eeko-kon/py4e/blob/master/Workflownew.py#L56
This comes from the SiriusMSFile Class, since you would like to store a .ms file (internally - in memory).
https://github.com/OpenMS…
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Greetings,
I am currently performing close search - IonQuant - MBR. I am consistently experiencing failed runs.
I am experiencing the error of: **_2021-04-01 00:44:13 [ERROR] - Protein sp|Q4VXU2|…