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The recent attempt to publish via GitHub actions [failed](https://github.com/nextflow-io/vscode-language-nextflow/actions/runs/8394949224/job/22993154309):
```
Publishing 'nextflow.nextflow v0.3.2…
ewels updated
7 months ago
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## Bug report
When running workflows with google-batch, I sometimes get an `UNAVAILABLE: 502:Bad Gateway` error which causes a workflow to be interrupted regardless of my error strategy. This is r…
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Add a "decoy" flag here:
https://github.com/OpenMS/OpenMS/blob/develop/src/openms/source/FORMAT/MascotGenericFile.cpp#L85
and then probably here check if it is set:
https://github.com/OpenMS/…
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Hello,
I am new to nextflow and have trouble understanding this error. Any help would be highly appreciated.
Error:
Error executing process > 'maxbin2 (1)'
Caused by:
Failed to create C…
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The suite of tools will need a container to run on nextflow.
Lets call the container `NeoantigenEditing` version `1.0.0`
and push it to: https://hub.docker.com/u/mskcc
Have a look at this file for r…
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Hi,
I had recently been able to run the nextNEOpi pipeline through (after some minor modification). When looking at the results section I noticed that the `./results/neoantigens/[sample]/Class_II`…
dmgie updated
5 months ago
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## Bug report
When using spot instances on GCP, preempted runs fail and do not report the information about the reason why they failed. I also think the exit code is not properly fetched and retur…
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### Operating System
CentOS 7
### Other Linux
CentOS Linux 7 (Core)
### Workflow Version
v2.1.0
### Workflow Execution
Command line (Cluster)
### Other workflow execution
_No response_
### E…
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Out team would like to embed StellarPGx within an existing nextflow pipeline that includes additional tools to genotype CYP2D6.
This is not possible with the original nextflow syntax, which StellarP…
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Dear StellarPGx,
I'm applying your pipeline for using in pharmcat and I got this error message. im running it through our cluster. Please advise how I can fix this problem.
this is the command
…