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Erik;
Thanks so much for the work and the most recent updates. Those fixed the issues with target regions and min_entropy (#165) but unfortunately did not resolve the underlying issue with loss in sen…
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So I suggest this with some guilt, as implementing ambiguous nucleotides in some of our stuff is a rather fresh and painful memory... but it'd be really cool if `swarm` allowed Ns. I'll have to stick …
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Your Week 1 notebook needs to have information on
- What samples
- how libraries were made
- what type of sequencing
sr320 updated
9 years ago
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What are the DNA sample requirements for sending BGI samples for GBS or RADseq?
sr320 updated
9 years ago
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sr320 updated
9 years ago
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What is one thing you are having trouble with, that if solved would have the greatest impact on your analysis workflow?
sr320 updated
9 years ago
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Hi Brad,
I am running a test of your code for adaptor trimming (http://coderscrowd.com/app/codes/view/224), the unit test is Ok. I don't see though why this code would not work for long reads. In the…
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Hi,
I am analysing some RAD-sequencing data using your pipelines.
RAD-seq protocols generates sequences next to restriction enzyme cutting sites. So the data is spread across the genome, thus calling…