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Hi,
Thank you for putting together this model and sharing the data! I want to run this TLS HookNet on my own data which is aperio pyramidal svs files. However, when I try to resample the images t…
mpl24 updated
4 months ago
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This issue was raised on forum thread https://forum.image.sc/t/qupath-cant-open-svs-images-from-aperio-versa-slide-scanner/93502/8 and appears to be very similar to issues seen with other formats such…
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**Describe the bug**
caMicroscope viewer launches and fails to find TileSource for 5 seconds: in white in the background "Unable to open [object Object]: HTTP 404 attempting to load TileSource" and i…
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SVs that are not fully and uniquely identified with their short variant id will need a different treatment for recurring dismissals (and likely some other user assessments). This is potentially a larg…
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```
============================================================= test session starts ==============================================================
platform linux -- Python 3.10.14, pytest-8.1.1, p…
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I would like to generate reads with specified SVs inserted. It doesn't look like it's supported. The vcfs are skipped due to non-ACGT character in the ALT field.
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### Description
As a user I would like to convert a WSI in Aperio SVS format to Hamamatsu NDPI file. Is this possible?
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### Slide format
SVS CZI
### Issue details
There were discussions on whether the SATURATE operator is needed or can be ignored (#440). It seems the SATURATE operator was introduced to avoid seams c…
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How the OpenSeaDragon viewer supports displaying **SVS** images?
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The 'tissue_percent' parameter does not support NDPI files.