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Hello. Great package - however, I have a question about defining conditions.
In our experiment expression data and genotype data were obtained from 50 patients commencing drug treatment, The sample…
ghost updated
2 months ago
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Related to
- #3221
we have:
```yaml
id: UBERON:8480056
name: left supraclavicular lymph node
def: "Supraclavicular lymph node located on the left side of a entire appendicul…
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I selected about 16,000 cells from 9 tissues of mouse and wanted to annotate with Cell ID. I followed the example code but got an error in RunCellHGT() function with default parameter. Here is what th…
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Hi @davek44
we have ATAC-seq data in different tissues and we want use the basenji to predict the activaty of snps. We wonder we put all the ATAC-seq in different tissues togother to the bsenji for…
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For the portal stats, include counts of how many specimens have: 1) tissues; 2) mappable; 3) media; 4) all three; 5) tissues and media. This could be extended to a per collection basis but at least ne…
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There's a tree, different sections of the the same piece of tissue, different pieces of tissue from the same type of tissue of the same subject, different types of tissues in the same subject, differe…
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Well, i use my GWAS sumstat and have only tissues related to brain in the first output. (in "for" loop i have all tissues, but not all in output)
Does it mean that this disease contribute only in br…
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| Exercise | Description | Completion |
| --------: | ------- | ------- |
| Q1A | Construct dictionary of paired gene-tissue data from gene-tissue file | No |
| Q1B | Comments | No |
| Q2A | Const…
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Hi, I have a couple of questions about the Normalized bulk transcriptomics according to your paper and GTEx pipeline, as below:
1. Discard under-represented tissues (n = 5), namely bladder,
cervix (…
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I would like to add synonyms to the search terms such as the term `kleenex` could pull results for documents with text that contains `tissues`. Would i store this in a text analyzer or is that not imp…