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We're trying to run Coreugate but it's failing at the chewie stages with what looks like an invalid argument. Did the `--fr` arg get dropped at some point? This is what I'm seeing:
```Perform allel…
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Hello
I have a new problem since moving to v1.6.
The select_snps function does not print out the *.divergent_SNPs.txt file.
The *.het file is empty.
I guess this has to do with vcftools but th…
RJDan updated
9 months ago
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Currently, we expect ensembl gene name to have a format like `ENSG00000223972`. This only works with older ensembl database versions. Using ensembl v105, the gene names are like `ENSG00000223972.5` -…
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Hy, I am trying to implement rosella in my binning workflow, but I have some problems with flight. The error is the following and I attached also the conda environment which I created using the update…
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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We had recently a failed WTS sample - details are:
- https://data.umccr.org/subjects/SBJ03874
- wfr.a46a39b2875549f685317e1f82c44c0f
- trn.8566f439dd7b44d980dc4ba92cfd74dd
```
gds-view --gds-…
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Hi there! I've recently produced a few models using ftINIT on a particular cohort I'm interested in. After producing the models, I wanted to run a gene essentiality analysis on some metabolic tasks to…
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https://mp.weixin.qq.com/s/yVOpoehw594ww-f6iNVhjg
ixxmu updated
7 months ago
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### Description of the bug
When I launch the pipeline I get the following error
cat nf.output
/var/spool/slurm/d/job35576642/slurm_script: ligne13: bioinfo/nfcore-Nextflow-v21.10.6: Aucun fichie…
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## Problems
Similarly to #607, I found a number of pairs of reactions that are largely identical except one reduces FAD to FADH2 and the other reduces O2 to H2O2:
Reactant | FAD-dependent ID | O…